Package: snpAIMeR 2.1.1

snpAIMeR: Assess the Diagnostic Power of Genomic Marker Combinations

Population genetics package for designing diagnostic panels. Candidate markers, marker combinations, and different panel sizes are assessed for how well they can predict the source population of known samples. Requires a genotype file of candidate markers in STRUCTURE format. Methods for population cross-validation are described in Jombart (2008) <doi:10.1093/bioinformatics/btn129>.

Authors:Kim Vertacnik [cre, aut], Oksana Vernygora [aut], Julian Dupuis [aut]

snpAIMeR_2.1.1.tar.gz
snpAIMeR_2.1.1.zip(r-4.5)snpAIMeR_2.1.1.zip(r-4.4)snpAIMeR_2.1.1.zip(r-4.3)
snpAIMeR_2.1.1.tgz(r-4.4-any)snpAIMeR_2.1.1.tgz(r-4.3-any)
snpAIMeR_2.1.1.tar.gz(r-4.5-noble)snpAIMeR_2.1.1.tar.gz(r-4.4-noble)
snpAIMeR_2.1.1.tgz(r-4.4-emscripten)snpAIMeR_2.1.1.tgz(r-4.3-emscripten)
snpAIMeR.pdf |snpAIMeR.html✨
snpAIMeR/json (API)
NEWS

# Install 'snpAIMeR' in R:

install.packages('snpAIMeR', repos = c('https://kvertacnik.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/oksanave/snpaimer/issues

On CRAN:

2.00 score 1 scripts 168 downloads 1 exports 89 dependencies

Last updated 9 months agofrom:7049c037e3. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 17 2024
R-4.5-win	OK	Nov 17 2024
R-4.5-linux	OK	Nov 17 2024
R-4.4-win	OK	Nov 17 2024
R-4.4-mac	OK	Nov 17 2024
R-4.3-win	OK	Nov 17 2024
R-4.3-mac	OK	Nov 17 2024