Package: snpAIMeR 2.1.1

snpAIMeR: Assess the Diagnostic Power of Genomic Marker Combinations

Population genetics package for designing diagnostic panels. Candidate markers, marker combinations, and different panel sizes are assessed for how well they can predict the source population of known samples. Requires a genotype file of candidate markers in STRUCTURE format. Methods for population cross-validation are described in Jombart (2008) <doi:10.1093/bioinformatics/btn129>.

Authors:Kim Vertacnik [cre, aut], Oksana Vernygora [aut], Julian Dupuis [aut]

snpAIMeR_2.1.1.tar.gz
snpAIMeR_2.1.1.zip(r-4.7)snpAIMeR_2.1.1.zip(r-4.6)snpAIMeR_2.1.1.zip(r-4.5)
snpAIMeR_2.1.1.tgz(r-4.6-any)snpAIMeR_2.1.1.tgz(r-4.5-any)
snpAIMeR_2.1.1.tar.gz(r-4.7-any)snpAIMeR_2.1.1.tar.gz(r-4.6-any)
snpAIMeR_2.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
snpAIMeR/json (API)
NEWS

# Install 'snpAIMeR' in R:

install.packages('snpAIMeR', repos = c('https://kvertacnik.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/oksanave/snpaimer/issues

On CRAN:

1.70 score 1 scripts 174 downloads 1 exports 88 dependencies

Last updated from:7049c037e3. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	145
source / vignettes	OK	191
linux-release-x86_64	OK	147
macos-release-arm64	OK	128
macos-oldrel-arm64	OK	129
windows-devel	OK	81
windows-release	OK	88
windows-oldrel	OK	74
wasm-release	OK	137