Type: Package
Package: snpAIMeR
Title: Assess the Diagnostic Power of Genomic Marker Combinations
Version: 2.1.1
Authors@R: c(
    person("Kim", "Vertacnik", , "kim.vertacnik@mailbox.org", role = c("cre", "aut"),
           comment = c(ORCID = "0009-0006-7097-5091")),
    person("Oksana", "Vernygora", role = "aut",
           comment = c(ORCID = "0000-0001-6444-3888")),
    person("Julian", "Dupuis", role = "aut",
           comment = c(ORCID = "0000-0002-6989-9179"))
  )
Description: Population genetics package for designing diagnostic
        panels. Candidate markers, marker combinations, and different
        panel sizes are assessed for how well they can predict the
        source population of known samples. Requires a genotype file of
        candidate markers in STRUCTURE format. Methods for population
        cross-validation are described in Jombart (2008)
        <doi:10.1093/bioinformatics/btn129>.
License: MIT + file LICENSE
Contact: Kim Vertacnik <kim.vertacnik@mailbox.org> or Julian Dupuis
        <julian.dupuis@uky.edu>
URL: https://github.com/OksanaVe/snpAIMeR
Depends: R (>= 2.10)
Imports: adegenet, doParallel, dplyr, forcats, foreach, ggplot2,
        graphics, magrittr, parallel, readr, tidyr, utils, withr, yaml
Suggests: testthat (>= 3.0.0)
Config/testthat/edition: 3
Encoding: UTF-8
RoxygenNote: 7.3.1
NeedsCompilation: no
Packaged: 2026-10-13 09:25:02 UTC; root
Author: Kim Vertacnik [cre, aut]
        (<https://orcid.org/0009-0006-7097-5091>), Oksana Vernygora
        [aut] (<https://orcid.org/0000-0001-6444-3888>), Julian Dupuis
        [aut] (<https://orcid.org/0000-0002-6989-9179>)
Maintainer: Kim Vertacnik <kim.vertacnik@mailbox.org>
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libuv1-dev
        libxml2-dev libx11-dev zlib1g-dev
Repository: https://kvertacnik.r-universe.dev
Date/Publication: 2024-02-21 02:33:01 UTC
RemoteUrl: https://github.com/cran/snpAIMeR
RemoteRef: HEAD
RemoteSha: 7049c037e3531cb5e687fa2d06a9e09509175621